Browse of TCMCG005C12554 protein

CDS

Accession Number	TCMCG005C12554
gbkey	CDS
Protein Id	XP_020260753.1
Location	complement(join(29730740..29730854,29731769..29732154,29736884..29737069,29737863..29738036,29738142..29738273,29738369..29738599,29740108..29740185,29740285..29740350,29740448..29740528,29740616..29741379,29744627..29744832,29749387..29749481,29754104..29754244,29757054..29757131,29758546..29758674,29762121..29762255,29769362..29769478,29769592..29769643,29769908..29770039,29776778..29776830,29776958..29777053,29780463..29780608,29781632..29781770,29782622..29782775,29783495..29783641,29787639..29787970))
Gene	LOC109837079
GeneID	109837079
Organism	Asparagus officinalis

Protein

Length	1454aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA376608;
db_source	XM_020405164.1
Definition	cleavage and polyadenylation specificity factor subunit 1 isoform X2

EGGNOG-MAPPER Annotation

COG_category	A
Description	Cleavage and polyadenylation specificity factor subunit 1
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K14401        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03015        [VIEW IN KEGG] map03015        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003729        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006378        [VIEW IN EMBL-EBI] GO:0006379        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006397        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016071        [VIEW IN EMBL-EBI] GO:0031123        [VIEW IN EMBL-EBI] GO:0031124        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043631        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0090305        [VIEW IN EMBL-EBI] GO:0090501        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAGCTACGCTGCCTTCAAGATGATGCACTGGCCTACGGGCATCGAGAACTGCGCCTCGGGCTTCATCACTCACTCTCCCGCCGACGCCGCCGCCTCCGTGATCCTCCCTCATTTGCAACCCGACGACCTCGACTCCGATTTCGCACCAACGCGACGAATCGGTCCAATCCCCAACCTCGTCGTCACTGCCGGCAATGTGGTCGAGGTCTACATCGTTAGGGTTCAGGAAGACGACGCCAGGGTCTCCCAGGCCCCAATAGAGCCTCGAGGAGGGGGCGGCATCATGGACGGGCTTCGTGGGGCCCGCCTGGAGCTAGTCTGCCATTACAGATTGCATGGGAATGTTCAATCCATGGCGGTGTTATCTTTGGGAGGAGATGAACGAAGTAAGAGACGAGATTCAATAGTTTTGGCATTTCAAGATGCCAAACTTACTGTTCTTGAATATGATGATTCTACACATGGATTGCGCACTAGTTCAATGCATTGTTTTGAAGGACCAGATTGGCTTTTCCTGAAAAAAGGCAGGGAATCATTTGCTATGGGCCCTCTAGTAAAGGCTGATCCCTTGGGTCGATGTGGTGGAGCACTTGTCTATGATCTTCAGATGATAGTTCTCAAGGCTGCTCAGACTGGCCAAGGACTAGTTACAGATGATGAGCCTACTAGCGTGGGAGGTAGTACTGCTGCAGTTCGTATAGAGTCATCGTATGTAATTAACTTGCGGGAGTTGGATATGAAGCATGTTAAAGATTTCACATTTGTACATGGTTATATCGAACCTGTTATGGTCTTTCTTCACGAAAGGGAGCCTACTTGGGCTGGACGTATCTCATGGAAGCATCATACATGCTTGATATCTGCCCTAAGCATCAGCACAACCCTAAAACAACATCCTTTAATTTGGTCTGCTGCCAATCTTCCACATGATGCTTACAAACTTCTCGCCGTGCCTTCTCCTATTGGTGGTGTCCTTGTGATATGTGCAAATAGCATCCATTATCACAGTCAGTCTTCATCTTGTGCACTTGGCCTTAACAGTTTTGCCATGCAGATGGATAGTAGCTCAGACATGCCAAAAGCTAGCTTCAATGTGGAGCTTGATGCGGCAAAAGCTACATGGCTTTCTCCTGATGTTGTCATCTTCTCTTCAAAAAATGGAGAGCTACTCTTACTTACGTTGGTTTCTGATGGAAGAATCGTGCAGAAACTTGACCTTATGAAATCTAAAGCATCCGTTTTGACCTCGGGAATCACAACAATGGGGAGTTCTTTCTTTTTCTTGGGTAGTCGGTTGGGAGACAGTCTTCTTGTGCAGTATAGTTATGGGGCATCATCCCCAACTTCTGCACATGTAAAAGATGAGATTGCTGAAATTGAAGGTGATGTTCCAGCAGTAAAACGATTAAAGAGGATGTCATCTGATTCCCTTCAGGATGTTGCAAGTGCTGAGGAGCTTTCTTTGTATGCTACAGCTCCAAATAGTTCAGAATCAACACAGAAGGTCTTCTCCTTTGCAGTTCGTGATACATTGATTAATGTTGGCCCGCTAAAGGACTTTTCGTATGGTTTGAGGATAAATGCTGATCCAAATGCAACAGGACTTGCAAAGCAAAGCAACTATGAATTGGTTTGCTGCTCCGGACATGGAAAGAATGGTGCCCTTTGTGTTCTTCAGCAATCAATACGGCCCGAATTGATTACTGAGGTTGAGTTGCCTGGTTGCAAAGGAATTTGGACTGTGTACCATAAGAGCTCACGTAGACATGCAGTTGATTCTTCAAAGACATTGACAGAAGATGACGAATACCATGCATATTTGATTATAAGTTTGGAGACCCGTACAATGGTCCTCGAGACTGCTGATGATTTGGGAGAGGTTACAGAAAGTGTTGGCTATTATGTTCAAGGCAGTACAATAGCTGCAGGAAACTTATTTGGAAGGCGTCGAGTTGTCCAGATTTTTGCACGTGGTGCTCGTATTCTTGATGGCTCTTATATGACACAGGAGTTGAGTTTCGCCATGAATAATTCTGAATCAGCTTCATCAGCTTCTAATTCAGAGCCTTCAACAGTATCATCTGTTTCTATAGCCGATCCCTATGTCTTACTGAAAATGACTGATGGGAGCATTCAATTGCTCGCCGGAGACACATCCACCTGTACAGTCTCTGTTAATGTCCCAGCTAGGTTTGCGAGTTTAACAGACCCTATTTCTGCCTGTACCCTTTATCATGATAAAGGACCTGAACCATGGCTCCGCAAGGCAAGTAGCGACGCATGGCTTTCTACTGGAATTGCTGAGGCAATTGATGGAAGTGATGGATCATATCCCGATCAGGGTGACATATATTGTCTGGTTTGCTATGAAAGCGGAATACTTGAAATATTCGATGTGCCAAATTTTAGATCTGTTTTTTCTGTAGATAAATTCATGTCTGGCAAGTCCCATCTTATGGATATGTGTATTGTTCCTCAAAAAACAAAACCCAGGAATTTTGAAGAGACAATAAAAAAGGAACCTACACAAAACTTGAAGGTCATGGAATTGGTTATGCAAAGATGGTCTGGTCAGTATAGTAGACCATTTCTTTTTGCGATACTGAATGATGGGACAATGCTTTCTTATCATGCTTATCTATACGAGGGCCAGGAAAATGCACCAAAAGCCGAAGACGCACTGTCCCCACATAGTTCAAGTAATATGAACAGTACTGGCACATCAAGAATGAGAAATCTGAGGTTTCAACGTGTTTCTATAGACACTAATATACAAGAAGATTCATCGAATGTTACTGTACGTCCAAGAATTACAATATTTAAGAACGTTGGCGGCTATCAGGGTTTATTTCTTACAGGGTCAAGACCAGCTTGGTTTATGCTCTGCAGAGAACGACTTAGAGTGCATCCACAGCTTTGTGACGGCTCAATCGTTGCCTTTACTGTTCTGCACAATGTAAATTGTAATCATGGACTGATATATGTCACATCACAGGGTTATTTGAAAATATGCCAATTGCCATCTGCATGCAACTATGATAACTACTGGCCAGTTCAGAAGATTCCGTTGAGGGGAACACCGCATCAAGTCACCTATTTTGCGGAAAAGAGCCTGTATCCAGTCATAGTTTCAGTTCCTGTTGTCAGACCCCTTAGTCAAGTGTTATCTTCATTAGTTGATCAAGATAGTGGCAATCAGATGGACCAGGACACAGTAAGTTCTGATGGTCTACAGAACAATTATTGTATAGATGAATTTGAGGTGCGAATTTTTGAACCTGAGAAGTCCGGAGGACATTGGGAACCAAAAGCTACAATTCCAATGCAAACTTCTGAAAATGCTCTCACTGTGAGAATGGTCACGCTGCTTAATTCAACAACAAAGGAAAATGAAAGCCTTTTGGCCATCGGAACAGCTTATGTTCAAGGAGAGGATATAGCTGCTAGAGGAAGAGTTCTTCTGTTTTCTATTGGCAGAAATAGTGAGAATCTCCAAAATCTGGTATCAGAGGTTTACTCTAAAGAACTAAAGGGTGCTATCTCAGCTTTAGCATCTCTTCAGGGTCACTTGCTGATTGCATCTGGACCAAAAATAATCCTGCACAAGTGGACAGGTTCAGAGTTGGTTGGTGTTGCCTTTTACGATGCTCCTTTGCATGTCGTGAGCTTGAATATAGTTAAAAATTTTATCCTTTTGGGTGATATTCACAAAAGTATATACTTCCTCAACTGGAAAGAACAAGGTGCTCAATTAAGTTTGTTGGCCAAAGATTTTGGCTCGCTAGACTGTTTTGCAACAGAGTTTTTGATCGACGGAAGTACACTTAGCCTGGTTGTTTCAGATGATCAGAAGAATATCCAGATATTCTACTATGCACCGAAAATGTTGGAGAGTTGGAAAGGACAGAAGCTTCTATCAAGAGCAGAGTTCCATGCCGGAGCACATATTACAAAATTTTTAAGGTTGCAAATGCTACCAACATCCTCTGACCGAGCAAGTGGAGCACCAGGGTCTGATAAGACCAACCGTTTTGCCCTTTTATTTGGTACTCTAGATGGGAGTATTGGTTGTGTTGCACCACTAGAGGAGCTCACTTTCCGCAGACTTCAGACCTTACAAAAGAGATTAGTAGATGCTGTTCCTCATGTGTGTGGATTGAACCCTAGATCATTCCGACAATTTCACTCAAATGGAAAGGCACATCGTCCTGGCCCTGATAACATGGTCGATTTTGAGCTTCTCTCCCATTATGAATTGTTGCCTCTGGAGGAACAACTGGAAATAGCGCATCAAATCGGGACTACCCGTTCACAGATTCTTTCCAATTTAAATGATCTTTCCCTGGGAACAAGCTTTTTGTAG

Protein:   MSYAAFKMMHWPTGIENCASGFITHSPADAAASVILPHLQPDDLDSDFAPTRRIGPIPNLVVTAGNVVEVYIVRVQEDDARVSQAPIEPRGGGGIMDGLRGARLELVCHYRLHGNVQSMAVLSLGGDERSKRRDSIVLAFQDAKLTVLEYDDSTHGLRTSSMHCFEGPDWLFLKKGRESFAMGPLVKADPLGRCGGALVYDLQMIVLKAAQTGQGLVTDDEPTSVGGSTAAVRIESSYVINLRELDMKHVKDFTFVHGYIEPVMVFLHEREPTWAGRISWKHHTCLISALSISTTLKQHPLIWSAANLPHDAYKLLAVPSPIGGVLVICANSIHYHSQSSSCALGLNSFAMQMDSSSDMPKASFNVELDAAKATWLSPDVVIFSSKNGELLLLTLVSDGRIVQKLDLMKSKASVLTSGITTMGSSFFFLGSRLGDSLLVQYSYGASSPTSAHVKDEIAEIEGDVPAVKRLKRMSSDSLQDVASAEELSLYATAPNSSESTQKVFSFAVRDTLINVGPLKDFSYGLRINADPNATGLAKQSNYELVCCSGHGKNGALCVLQQSIRPELITEVELPGCKGIWTVYHKSSRRHAVDSSKTLTEDDEYHAYLIISLETRTMVLETADDLGEVTESVGYYVQGSTIAAGNLFGRRRVVQIFARGARILDGSYMTQELSFAMNNSESASSASNSEPSTVSSVSIADPYVLLKMTDGSIQLLAGDTSTCTVSVNVPARFASLTDPISACTLYHDKGPEPWLRKASSDAWLSTGIAEAIDGSDGSYPDQGDIYCLVCYESGILEIFDVPNFRSVFSVDKFMSGKSHLMDMCIVPQKTKPRNFEETIKKEPTQNLKVMELVMQRWSGQYSRPFLFAILNDGTMLSYHAYLYEGQENAPKAEDALSPHSSSNMNSTGTSRMRNLRFQRVSIDTNIQEDSSNVTVRPRITIFKNVGGYQGLFLTGSRPAWFMLCRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGYLKICQLPSACNYDNYWPVQKIPLRGTPHQVTYFAEKSLYPVIVSVPVVRPLSQVLSSLVDQDSGNQMDQDTVSSDGLQNNYCIDEFEVRIFEPEKSGGHWEPKATIPMQTSENALTVRMVTLLNSTTKENESLLAIGTAYVQGEDIAARGRVLLFSIGRNSENLQNLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWTGSELVGVAFYDAPLHVVSLNIVKNFILLGDIHKSIYFLNWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLVVSDDQKNIQIFYYAPKMLESWKGQKLLSRAEFHAGAHITKFLRLQMLPTSSDRASGAPGSDKTNRFALLFGTLDGSIGCVAPLEELTFRRLQTLQKRLVDAVPHVCGLNPRSFRQFHSNGKAHRPGPDNMVDFELLSHYELLPLEEQLEIAHQIGTTRSQILSNLNDLSLGTSFL